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UNC IDEA Group
Biomedical Research Imaging Center
CB #7513
130 Mason Farm Road,
Chapel Hill, NC 27599

 
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Journals

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  1. "Predicting Future Clinical Changes of MCI Patients Using Longitudinal and Multimodal Biomarkers", accepted for PLOS One. [Daoqiang Zhang, Dinggang Shen]
  2. "The Synchronization within and Interaction between the Default and Dorsal Attention Networks in Early Infancy", accepted for Cerebral Cortex. [Wei Gao, John H Gilmore, Dinggang Shen, Jeffery Keith Smith, Hongtu Zhu, Weili Lin]
  3. "Learning Image Context for Segmentation of Prostate in CT-Guided Radiotherapy", accepted for Physics in Medicine and Biology. [Wei Li, Shu Liao, Qianjin Feng, Wufan Chen, Dinggang Shen]
  4. "Ensemble Sparse Classification of Alzheimer's Disease", accepted for Neuroimage. [Manhua Liu, Daoqiang Zhang, Dinggang Shen]
  5. "Application of Neuroanatomical Features to Tractography Clustering", accepted for Human Brain Mapping. [Qian Wang, Pew-Thian Yap, Guorong Wu, Dinggang Shen]
  6. “Axonal Fiber Terminations Concentrate on Gyri”, accepted for Cerebral Cortex. [Jingxin Nie, Lei Guo, Kaiming Li, Yonghua Wang, Guojun Chen, Longchuan Li, Hanbo Chen, Fan Deng, Xi Jiang, Tuo Zhang, Ling Huang, Carlos Faraco, Degang Zhang, Cong Guo, Pew-Thian Yap, Xintao Hu, Gang Li, Jinglei Lv, Yixuan Yuan, Dajiang Zhu, Junwei Han, Dean Sabatinelli, Qun Zhao, L Stephen Miller, Bingqian Xu, Ping Shen, Simon Platt, Dinggang Shen, Xiaoping Hu, Tianming Liu]
  7. “Hierarchical Alignment of Breast DCE-MR Images by Groupwise Registration and Robust Feature Matching", accepted for Medical Physics. [Minjeong Kim, Guorong Wu, Dinggang Shen]
  8. “Consistent Reconstruction of Cortical Surfaces from Longitudinal Brain MR Images”, accepted for Neuroimage. [Gang Li, Jingxin Nie, Guorong Wu, Yaping Wang, Dinggang Shen]
  9. “Identification of MCI Individuals Using Structural and Functional Connectivity Networks”, accepted for Neuroimage. [Chong-Yaw Wee, Pew-Thian Yap, Daoqiang Zhang, Kevin  Denny, Jeffrey N Browndyke, Guy G Potter, Kathleen A Welsh-Bohmer, Lihong  Wang, Dinggang Shen]
  10. “Directed Graph Based Image Registration”, Computerized Medical Imaging and Graphics, 36:139–151, Mar. 2012. [Hongjun Jia, Guorong Wu, Qian Wang, Yaping Wang, Minjeong Kim, and Dinggang Shen]
  11. “Multi-Modal Multi-Task Learning for Joint Prediction of Multiple Regression and Classification Variables in Alzheimer's Disease”, accepted for Neuroimage. [Daoqiang Zhang, Dinggang Shen]
  12. "A General Fast RegistrationFramework by Learning Deformation-Appearance Correlation", accepted for IEEE Trans. Image Processing. [Minjeong Kim, Guorong Wu, Pew-Thian Yap, Dinggang Shen]
  13. "Longitudinal Development of Cortical and Subcortical Gray Matter from Birth to 2 Years", accepted for Cerebral Cortex. [John H. Gilmore, Feng Shi, Sandra Woolson, Rebecca C. Knickmeyer , Sarah J. Short , Weili Lin, Hongtu Zhu, Robert M. Hamer, Martin Styner, Dinggang Shen]
  14. “Computational Growth Model for Measuring Dynamic Cortical Development in the First Year of Life”, accepted for Cerebral Cortex. [Jingxin Nie, Gang Li, Li Wang, John H. Gilmore, Weili Lin, Dinggang Shen]
  15. "Iterative Multi-Atlas-Based Multi-Image Segmentation with Tree-Based Registration," accepted for NeuroImage. [Hongjun Jia, Pew-Thian Yap, Dinggang Shen]
  16. “Temporal and Spatial Evolution of Brain Network Topology during the First Two Years of Life”, PLoS ONE 6(9): e25278, Sep. 2011. [Wei Gao, John H Gilmore, Kelly S Giovanello, Jeffery Keith Smith, Dinggang Shen, Hongtu Zhu, and Weili Lin]
  17. “Longitudinally Guided Level Sets for Consistent Tissue Segmentation of Neonates”, accepted for Human Brain Mapping. [Li Wang, Feng Shi, Pew-Thian Yap, Weili Lin, John H. Gilmore, and Dinggang Shen]
  18. "Learning Statistical Correlation for Fast Prostate Registration in Image-guided Radiotherapy", accepted for Medical Physics. [Yonghong Shi, Shu Liao, Dinggang Shen]
  19. “Development Trends of White Matter Connectivity in the First Years of Life”, PLoS ONE, vol. 6, no. 9, pp. e24678, 2011. [Pew-Thian Yap, Yong Fan, Yasheng Chen, John Gilmore, Weili Lin, Dinggang Shen]
  20. "Longitudinal regression analysis of spatial–temporal growth patterns of geometrical diffusion measures in early postnatal brain development with diffusion tensor imaging", accepted for Neuroimage. [Yasheng Chen, Hongyu An, Hongtu Zhu, Valerie Jewells, Diane Armao, Dinggang Shen, John H. Gilmore, and Weili Lin]
  21. “A Novel Framework for Longitudinal Atlas Construction with Groupwise Registration of Subject Image Sequences”, accepted for Neuroimage. [Shu Liao, Hongjun Jia, Guorong Wu, and Dinggang Shen]
  22. “Registration of Longitudinal Brain Image Sequences with Implicit Template and Spatial-Temporal Heuristics”, accepted for Neuroimage. [Guorong Wu, Qian Wang, Dinggang Shen]
  23. "Automatic Segmentation of NeonatalImages Using Convex Optimizationand Coupled Level Sets", NeuroImage, 58:805-817, Jul. 2011. [Li Wang, Feng Shi, Weili Lin, John H. Gilmore, Dinggang Shen]
  24. “Hierarchical Anatomical Brain Networks for MCI Prediction: Revisiting Volumetric Measures”, PLoS ONE, 6(7): e21935, Jul. 2011. [Luping Zhou, Yaping Wang, Yang Li, Pew-Thian Yap, Dinggang Shen]
  25. "POPTRACT: Population-Based Tractography", accepted for IEEE Trans. on Medical Imaging. [Pew-Thian Yap, John H. Gilmore, Weili Lin, Dinggang Shen]
  26. "Consistent Sulcal Parcellation of Longitudinal Cortical Surfaces", NeuroImage, 57(1):76-88, Jul. 2011. [Gang Li, Dinggang Shen]
  27. "SharpMean: Groupwise Registration Guided by Sharp Mean Image and Tree-based Registration", NeuroImage, 56(4): 1968-1981, Jun. 2011. [Guorong Wu, Hongjun Jia, Qian Wang, Dinggang Shen] (free software package available)
  28. "Infant Brain Atlases from Neonates to 1- and 2-year-olds", PLoS ONE, 6(4): e18746, Apr. 2011. [Feng Shi, Pew-Thian Yap, Guorong Wu, Hongjun Jia, John H. Gilmore, WeiliLin, Dinggang Shen] (free software package available)
  29. "Sex Differences in Grey Matter Atrophy Patterns Among AD and aMCI Patients: Results from ADNI", Neuroimage, 56:890-906. [Martha Skup, Hongtu Zhu, Yaping Wang, Kelly S. Giovanello, Ja-an Lin, Dinggang Shen, Feng Shi, Wei Gao, Weili Lin, Yong Fan, Heping Zhang and The Alzheimer's Disease Neuroimaging Initiative]
  30. "Multimodal Classification of Alzheimer’s Disease and Mild Cognitive Impairment", Neuroimage, 55(3):856-867, Apr. 2011. [Daoqiang Zhang, Yaping Wang, Luping Zhou, Hong Yuan, Dinggang Shen]

  31. "SPHERE: SPherical Harmonic Elastic REgistration of HARDI Data", Neuroimage, 55(2):545-556, Mar. 2011. [Pew-Thian Yap, Yasheng Chen, Hongyu An, Yang Yang, John H Gilmore, Weili Lin, Dinggang Shen]

  32. "Discriminant analysis of longitudinal cortical thickness changes in Alzheimer's disease using dynamic and network features", Neurobiology of Aging, 33:427.e15– 427.e30. [Yang Li, Yaping Wang, Guorong Wu, Feng Shi, Luping Zhou, Weili Lin, Dinggang Shen]
  33. "Multiscale Adaptive Regression Models for Neuroimaging Data", Journal of the Royal Statistical Society. Series B, Statistical methodology, vol. 73, pp. 559-578, Sep. 2011. [Yimei Li, Hongtu Zhu, Dinggang Shen, Weili Lin, John H. Gilmoreand Joseph G. Ibrahim]
  34. "Feature-based Groupwise Registration by Hierarchical Anatomical Correspondence Detection," accepted for Human Brain Mapping. [Guorong Wu, Qian Wang, Hongjun Jia, Dinggang Shen] (free software package available)
  35. "Enriched White Matter Connectivity Networks for Accurate Identification of MCI Patients," NeuroImage, 54(3):1812-1822, Feb. 2011. [Chong-Yaw Wee, Pew-Thian Yap, Wenbin Li, Kevin Denny, Jeffrey N. Browndyke, Guy G. Potter, Kathleen A. Welsh-Bohmer, Lihong Wang, Dinggang Shen]
  36. "Intermediate Templates Guided Groupwise Registration of Diffusion Tensor Images," NeuroImage, 54:928-939, 2011. [Hongjun Jia, Pew-Thian Yap, Guorong Wu, Qian Wang, Dinggang Shen]
  37. “Brain Anatomical Networks in Early Human Brain Development”, Neuroimage, 54(3): 1862-1871, Feb. 2011. [Yong Fan, Feng Shi, Jeffrey Keith Smith, Weili Lin, John H. Gilmore, and Dinggang Shen]
  38. "CENTS: Cortical Enhanced Neonatal Tissue Segmentation", Human Brain Mapping, 32:382–396, Mar. 2011. [Feng Shi, Dinggang Shen, Pew-Thian Yap, Yong Fan, Jie-Zhi Cheng, Hongyu An, Lawrence L. Wald, Guido Gerig, John H. Gilmore, and Weili Lin]
  39. "Cerebral Blood Volume in Alzheimer’s Disease and Correlation with Tissue Structural Integrity", Neurobiology of Aging, 31(12):2038-2046, December 2010. [Jinsoo Uh, Kelly Lewis-Amezcua, Kristin Martin-Cook, Myron Weiner, Ramon Diaz-Arrastia, Michael Devous, Sr., Dinggang Shen, Hanzhang Lu]
  40. "Human Brain Connectomics:Networks, Techniques, and Applications," IEEE Signal Processing Magazine, 27(4), 131-134, July 2010. [Pew-Thian Yap, Guorong Wu, Dinggang Shen]
  41. "Segmenting CT prostate images using population and patient-specific statistics for radiotherapy", Medical Physics, 37(8), 4121-4132, Aug. 2010. [Qianjin Feng, Mark Foskey, Wufan Chen, Dinggang Shen]
  42. "Tissue Probability Map Constrained 4-D Clustering Algorithm for Increased Accuracy and Robustness in Serial MR Brain Image Segmentation", accepted for the International Journal of  Computational Intelligence and Healthcare Informatics. [Zhong Xue, Dinggang Shen, Hai Li, and Stephen Wong]
  43. "ABSORB: Atlas Building by Self-Organized Registration and Bundling", NeuroImage, 51(3):1057-1070, Mar. 2010. [Hongjun Jia, Guorong Wu, Qian Wang, Dinggang Shen] (free software package available)
  44. "Construction of Multi-Region-Multi-Reference Atlases for Neonatal Brain MRI Segmentation", NeuroImage, 51(2):684-693, Jun 2010. [Feng Shi, Pew-Thian Yap, Yong Fan, John H Gilmore, Weili Lin, Dinggang Shen]
  45. "Attribute Vector Guided Groupwise Registration", NeuroImage, 50(4):1485-1496, May 2010. [Qian Wang, Guorong Wu, Pew-Thian Yap, Dinggang Shen]
  46. "F-TIMER: Fast Tensor Image Morphing for Elastic Registration", IEEE Trans. on Medical Imaging, vol. 29, pp. 1192-1203, 2010. [Pew-Thian Yap, Guorong Wu, Hongtu Zhu, Weili Lin, Dinggang Shen]
  47. "TPS-HAMMER: Improving HAMMER Registration Algorithm by Soft Correspondence Matching and Thin-Plate Splines Based Deformation Interpolation", NeuroImage, 49(3):2225-2233, Feb  2010 . [Guorong Wu, Pew-Thian Yap, Minjeong Kim, Dinggang Shen] (free software package available)
  48. "Neonatal brain image segmentation in longitudinal MRI studies", Neuroimage, 49(1):391-400, Jan  2010. [Feng Shi, Yong Fan, Songyuan Tang, John H. Gilmore, Weili Lin, Dinggang Shen]
  49. "Groupwise Registration Based on Hierarchical Image Clustering and Atlas Synthesis", Human Brain Mapping, 31(8):1128-1140, Jan. 2010. [Qian Wang, Liya Chen, Pew-Thian Yap, Guorong Wu, Dinggang Shen]
  50. "STEP: Spatiotemporal enhancement pattern for MR-based breast tumor diagnosis", Medical Physics, 36(7): 3192-3204, July 2009. [Yuanjie Zheng, Sarah Englander, Sajjad Baloch, Evangelia I. Zacharaki, Yong Fan, Mitchell D. Schnall, Dinggang Shen]
  51. “Sampling the spatial patterns of cancer: Optimized biopsy procedures for estimating prostate cancer volume and Gleason Score”, Medical Image Analysis, (13)4: 609-620, August 2009. [Yangming Ou, Dinggang Shen, Jianchao Zeng, Leon Sun, Judd Moul, Christos Davatzikos]
  52. "Estimating Myocardial Motion by 4D Image Warping", Pattern Recognition, 42(11): 2514-2526, November 2009. [Hari Sundar, Harold Litt, Dinggang Shen]
  53. "TIMER: Tensor Image Morphing for Elastic Registration", Neuroimage, 47(2):549-63, Aug 15 2009. [Pew-Thian Yap, Guorong Wu, Hongtu Zhu, Weili Lin, Dinggang Shen]
  54. "White matter abnormalities revealed by diffusion tensor imaging in non-demented and demented HIV+ patients", Neuroimage, 47(4): 1154-1162, October 1 2009. [Yasheng Chen, Hongyu An, Hongtu Zhu, Taylor Stone, J. Keith Smith, Colin Hall, Elizabeth Bullitt, Dinggang Shen, Weili Lin]
  55. "Emergence of the brain’s default network: Evidence from two-week-old to 2-year-old healthy pediatric subjects", PNAS, 106(16): 6790-6795, April 2009. [Wei Gao, Hongtu Zhu, Kelly S. Giovanello, J Keith Smith, Dinggang Shen, John H Gilmore, Weili Lin]
  56. "Longitudinal pattern of regional brain volume change differentiates normal aging from MCI", Neurology, 72: 1906-1913, June 2009. [Ira Driscoll, Christos Davatzikos, Yang An, Xiaoying Wu, Dinggang Shen, Michael Kraut, Susan M Resnick]
  57. "RABBIT: Rapid Alignment of Brains by Building Intermediate Templates", Neuroimage, 47(4):1277-87, Oct 1 2009. [Songyuan Tang, Yong Fan, Dinggang Shen]
  58. "Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth", Neuroimage, 46: 762-774, 2009. [Evangelia Zacharaki, Cosmina Hogea, Dinggang Shen, George Biros, Christos Davatzikos]
  59. "MRI and PET dual detection for serial assessment of embryonic stem cells grafted in normal and infarcted myocardium", Radiology, 250(3): 821-829, March 2009. [Hui Qiao, Hualei Zhang, Yuanjie Zheng, Datta E. Ponde, Dinggang Shen, Fabao Gao, Ashley Bakken, Alexander Schmitz, Hank F Kung, Victor A. Ferrari, and Rong Zhou]
  60. "Fast Image Registration by Hierarchical Soft Correspondence Detection", Pattern Recognition, 42: 954-961, May 2009. [Dinggang Shen]
  61. "A New Statistically-Constrained Deformable Registration Framework for MR Brain Images", International Journal of Medical Engineering and Informatics, 1(3): 357:367, 2009. [Zhong Xue, Dinggang Shen]
  62. "Computer-Assisted Segmentation of White Matter Lesions in 3D MR images, Using Pattern Recognition", Academic Radiology, 15(3):300-313, March 2008. [Zhiqiang Lao, Dinggang Shen, Dengfeng Liu, Abbas F Jawad, Elias R Melhem, Lenore J Launer, Nick R Bryan, Christos Davatzikos]
  63. "ORBIT: A Multiresolution Framework for Deformable Registration of Brain Tumor Images", IEEE Trans. on Medical Imaging, 27(8):1003-1017, Aug. 2008. [Evangelia I. Zacharaki, Dinggang Shen, Seung-Koo Lee and Christos Davatzikos]
  64. "Segmenting Lung Fields in Serial Chest Radiographs Using Both Population-based and Patient-specific Shape Statistics", IEEE Trans. on Medical Imaging, 27(4):481~494, 2008. [Yonghong Shi, Feihu Qi, Zhong Xue, Liya Chen, Kyoko Ito, Hidenori Matsuo, Dinggang Shen]
  65. "Detection of Prodromal Alzheimer's Disease via Pattern Classification of MRI", Neurobiology of Aging, 29(4):514-523, April 2008. [C. Davatzikos, Y. Fan, X. Wu, D. Shen, S.M. Resnick]
  66. "Multimodality Image Registration by Maximization of Quantitative-Qualitative Measure of Mutual Information", Pattern Recognition, 41(1), 285-298, 2008. [Hongxia Luan, Feihu Qi, Zhong Xue, Liya Chen, Dinggang Shen]
  67. "Registering Histological and MR Images of Prostate for Image-based Cancer Detection", Academic Radiology, Vol 14, No 11, pp.1367-1381, November 2007. [Yiqiang Zhan, Yangming Ou, Michael Feldman, John Tomaszeweski, Christos Davatzikos, Dinggang Shen]
  68. "Multivariate examination of brain abnormality using both structural and functional MRI", Neuroimage, 36:1189–1199, 2007. [Yong Fan, Hengyi Rao, Hallam Hurt, Joan Giannetta, Marc Korczykowski, David Shera, Brian B. Avants, James. C. Gee, Jiongjiong Wang, and Dinggang Shen]
  69. "Unaffected Family Members and Schizophrenia Patients Share Brain Structure Patterns: a High-Dimensional Pattern Classification Study Biological Psychiatry", Biological Psychiatry, 63: 118-124, 2008.  [Yong Fan, Raquel E. Gur, Ruben C. Gur, Dinggang Shen, Monica E. Calkins, Christos Davatzikos]
  70. "Targeted Prostate Biopsy Using Statistical Image Analysis", IEEE Trans. on Medical Imaging, 26(6):779-788, June 2007. [Y. Zhan, D. Shen, J. Zeng, L. Sun, G. Fichtinger, J. Moul, C. Davatzikos]
  71. "COMPARE: Classification Of Morphological Patterns using Adaptive Regional Elements", IEEE Trans. on Medical Imaging, 26(1): 95-105, January 2007. [Yong Fan, Dinggang Shen, Ruben C. Gur, Raquel E. Gur, and Christos Davatzikos]
  72. "Coregistration of MR and SPECT Images for Non-invasive Localization of Stem Cells Grafted in the Infarcted Rat Myocardium", Molecular Imaging & Biology, 9(1):24-31, Jan-Feb, 2007. [Dinggang Shen, Dengfeng Liu, Zixiong Cao, Paul D. Acton, Rong Zhou]
  73. "Image Registration by Local Histogram Matching", Pattern Recognition, 40:1161-1172, 2007. [Dinggang Shen]
  74. "Hippocampus Volume Loss Due to Chronic Heavy Drinking", Alcoholism: Clinical and Experimental Research, 30(11):1866-70, Nov 2006. [Beresford TP, Arciniegas DB, Alfers J, Clapp L, Martin B, Du Y, Liu D, Shen D, Davatzikos C]
  75. "Hypercortisolism In Alcohol Dependence and Its Relation to Hippocampal Volume Loss", Journal of Studies on Alcohol, 76(6):861~867, Nov 2006. [Beresford TP, Arciniegas DB, Alfers J, Clapp L, Martin B, Beresford HF, Du Y, Liu D, Shen D, Davatzikos C, Laudenslager ML]
  76. "Simulating Deformations of MR Brain Images for Evaluation of Registration Algorithms", Neuroimage, 33:855-866, 2006. [Zhong Xue, Dinggang Shen, Bilge Karacali, Joshua Stern, David Rottenberg, Christos Davatzikos]
  77. "Learning-Based Deformable Registration of MR Brain Images", IEEE Trans. Medical Imaging, 25(9):1145-1157, Sept. 2006. [Guorong Wu, Feihu Qi, Dinggang Shen]
  78. "Statistical Representation of High-Dimensional Deformation Fields with Application to Statistically-Constrained 3D Warping", Medical Image Analysis, 10:740-751, 2006. [Zhong Xue, Dinggang Shen, Christos Davatzikos]
  79. "Deformable registration of brain tumor images via a statistical model of tumor-induced deformation", Medical Image Analysis, 10:752-763, 2006. [Ashraf Mohamed, Evangelia Zacharaki, Dinggang Shen, Christos Davatzikos]
  80. "Puberty-related influences on brain development", Molecular and Cellular Endocrinology, Volumes 254-255, Pages 154-162, 25 July 2006. [Jay N. Giedd, Liv S. Clasen, Rhoshel Lenroot, Dede Greenstein, Gregory L. Wallace, Sarah Ordaz, Elizabeth A. Molloy, Jonathan D. Blumenthal, Julia W. Tossell, Catherine Stayer, Carole A. Samango-Sprouse, Dinggang Shen, Christos Davatzikos, Deborah Merke and George P. Chrousos]
  81. "Past adult lead exposure is linked to neurodegeneration measured by brain MRI", Neurology, 66:1476-1484, 2006. [Walter F. Stewart, Brian S. Schwartz, Christos Davatzikos, Dinggang Shen, Dengfeng Liu, Xiaoying Wu, Andrew C. Todd, Weiping Shi, Susan Bassett, David Youssem]
  82. "Deformable Segmentation of 3-D Ultrasound Prostate Images Using Statistical Texture Matching Method", IEEE Trans. on Medical Imaging, 25(3):256-272, March 2006. [Yiqiang Zhan, Dinggang Shen]
  83. "CLASSIC: Consistent Longitudinal Alignment and Segmentation for Serial Image Computing", NeuroImage, 30:388-399, 2006. [Zhong Xue, Dinggang Shen, Christos Davatzikos]
  84. "An Adaptive Error Penalization Method for Training an Efficient and Generalized SVM", Pattern Recognition, (39):342-350, 2006. [Yiqiang Zhan, Dinggang Shen]
  85. "Classifying spatial patterns of brain activity with machine learning methods: application to lie detection", Neuroimage, 28:663-668, 2005. [C. Davatzikos, K. Ruparel, Y. Fan, D. Shen, M. Acharyya, J. Loughead, R.C. Gur, and D. Langleben]
  86. "Whole-brain morphometric study of schizophrenia reveals a spatially complex set of focal abnormalities", Archives of General Psychiatry, 62:1218-1227, Nov 2005. [Christos Davatzikos, Dinggang Shen, Ruben C. Gur, Xiaoyng Wu, Dengfeng Liu, Yong Fan, Paul Hughett, Bruce I. Turetsky, Raquel E. Gur]
  87. "Spatio-temporal maturation patterns of murine brain quantified via diffusion tensor MRI and deformation-based morphometry", Proceedings of the National Academy of Sciences (PNAS), 102(19):6978–6983, May 10, 2005. [Ragini Verma, Susumu Mori, Dinggang Shen, Paul Yarowsky, Jiangyang Zhang, Christos Davatzikos]
  88. "Design Efficient Support Vector Machine for Fast Classification", Pattern Recognition, 38:157-161, 2005. [Yiqiang Zhan, Dinggang Shen]
  89. "Automated Morphometric Study of Brain Variation in XXY Males", Neuroimage, 23(2):648-653, Oct 2004. [Dinggang Shen, Dengfeng Liu, Hong Liu, Liv Clasen, Jay Giedd, Christos Davatzikos]
  90. "Determining Correspondence in 3D MR Brain Images Using Attribute Vectors as Morphological Signatures of Voxels", IEEE Trans. on Medical Imaging, 23(10): 1276-1291, Oct 2004. [Zhong Xue, Dinggang Shen and Christos Davatzikos]
  91. "Deformable Registration of Cortical Structures via Hybrid Volumetric and Surface Warping", NeuroImage, 22:1790-1801, 2004 . [Tianming Liu, Dinggang Shen, Christos Davatzikos]
  92. "Measuring Temporal Morphological Changes Robustly in Brain MR Images Via 4-Dimensional Template Warping", NeuroImage,21:1508-1517, April 2004. [Dinggang Shen, Christos Davatzikos]
  93. "Optimization of Biopsy Strategy by A Statistical Atlas of Prostate Cancer Distribution", Medical Image Analysis, 8(2): 139-150, 2004 . [Dinggang Shen, Zhiqiang Lao, Jianchao Zeng, Wei Zhang, Isabel A. Sesterhenn, Leon Sun, Judd W. Moul, Edward H. Herskovits, Gabor Fichtinger, Christos Davatzikos] (the final version)
  94. "Lane detection and tracking using B-snake", Image and Vision Computing, 22(4):269-280, April 2004. [Yue Wang, Eam Khwang Teoh, and Dinggang Shen] (The Most Cited Paper Award for the journal Image and Vision Computing (selected from all journal articles published between the years 2004-2006), 2007)
  95. "Morphological classification of brains via high-dimensional shape transformations and machine learning methods", NeuroImage, Vol 21(1), pp 46-57, 2004. [Zhiqiang Lao, Dinggang Shen, Zhong Xue, Bilge Karacali, Susan M. Resnick, and Christos Davatzikos]
  96. "Spatial Normalization of Diffusion Tensor Fields", Magnetic Resonance in Medicine, 50 (1): 175-182 JUL 2003. [Dongrong XU, Susumu Mori, Dinggang Shen, Peter C. M. van Zijl, Christos Davatzikos]
  97. "Segmentation of Prostate Boundaries from Ultrasound Images Using Statistical Shape Model", IEEE Trans. on Medical Imaging, 22(4):539-551, April 2003. [Dinggang Shen, Yiqiang Zhan, Christos Davatzikos] (final version)
  98. "Hierarchical Active Shape Models, Using the Wavelet Transform", IEEE Trans. on Medical Imaging, 22(3):414-423, March 2003. [Christos Davatzikos, Xiaodong Tao, Dinggang Shen](final version)
  99. "Very High Resolution Morphometry Using Mass-Preserving Deformations and HAMMER Elastic Registration", NeuroImage, 18(1): 28-41, Jan 2003. [Dinggang Shen, Christos Davatzikos] (Used for this issue's cover) (final version)
  100. "HAMMER: Hierarchical Attribute Matching Mechanism for Elastic Registration", IEEE Trans. on Medical Imaging, 21(11):1421-1439, Nov 2002. [Dinggang Shen, Christos Davatzikos] (final version) (Best Paper Award, from MMBIA 2001) (2006 Best Paper Award, from IEEE Signal Processing Society, 2007) (source code),(standalone software package)
  101. "Spatial Normalization of Spine MR Images, for Statistical Correlation of Lesions with Clinical Symptoms", Radiology, 224(3):919-926, Sept 2002. [Christos Davatzikos, Dengfeng Liu, Dinggang Shen, Edward H. Herskovits]
  102. "Measuring Size and Shape of the Hippocampus in MR Images Using a Deformable Shape Model", NeuroImage, 15(2): 422-434, Feb 2002. [Dinggang Shen, Scott Moffat, Susan M. Resnick, and Christos Davatzikos](final version)
  103. "A constrain relationship for reflectional symmetry and rotational symmetry", SPIE Journal of Electronic Imaging, 10(4): 998-1002, Oct. 2001. [Dinggang Shen, Horace H. S. Ip, and Eam Khwang Teoh] (Proofreading version)
  104. "A Framework for Predictive Modeling of Anatomical Deformations", IEEE Trans. on Medical Imaging, Aug. 2001. [C. Davatzikos, Dinggang Shen, Ashraf Mohamed, and Stelios K. Kyriacou]
  105. "Robust detection of skewed symmetries by combining local and semi-local affine invariants", Pattern Recognition, 34(7):1417-1428, 2001 . [Dinggang Shen, Horace H. S. Ip, and Eam Khwang Teoh]
  106. "An efficient fuzzy algorithm for aligning shapes under affine transformations", Pattern Recognition, 34(6):1171-1180, June 2001. [Zhong Xue, Dinggang Shen, and Eam Khwang Teoh]
  107. "An energy of asymmetry for accurate detection of global reflection axes", Image and Vision Computing, Volume 19, Issue 5, pp.283-297, April 2001. [Dinggang Shen, Horace H. S. Ip, and Eam Khwang Teoh]
  108. "An adaptive-focus statistical shape model for segmentation and shape modeling of 3D brain structures", IEEE Trans. on Medical Imaging, 20(4):257-270, April 2001. [Dinggang Shen, Edward H. Herskovits, C. Davatzikos] (Paper with high resolution images)(Demo)
  109. "Affine invariant detection of perceptually parallel 3D planar curves", Pattern Recognition, 33(11):1909-1918, Nov. 2000.[Dinggang Shen, Horace H. S. Ip, and Eam Khwang Teoh]
  110. "An adaptive-focus deformable model using statistical and geometric information", IEEE Trans. on Pattern Analysis and Machine Intelligence (PAMI), 22(8):906-913, August 2000. [Dinggang Shen, C. Davatzikos]
  111. "Lane detection using spline model", Pattern Recognition Letters, 21(8): 677-689, July 2000. [Yue Wang, Dinggang Shen, and Eam Khwang Teoh]
  112. "Symmetry detection by generalized complex (GC) moments: a close-form solution", IEEE Trans. on Pattern Analysis and Machine Intelligence (PAMI), 21(5):466-476, May 1999. [Dinggang Shen, Horace H. S. Ip, Kent K T Cheung, and Eam Khwang Teoh]
  113. "Affine invariant image retrieval by correspondence matching of shapes", Image and Vision Computing, 17(7): 489-499, May, 1999.[Dinggang Shen, Wai-him Wong and Horace H S Ip]
  114. "Discriminative wavelet shape descriptors for invariant recognition of 2-D patterns", Pattern Recognition, 32(2):151-165, Feb. 1999. [Dinggang Shen and Horace H S Ip]
  115. "MRF regularizaton models for adaptive segmentation of non-uniform images", IEE Proceedings on Vision, Image and Signal Processing, Vol. 145, Issue 5, pp.322-332, October 1998. [Dinggang Shen and Horace H S Ip]
  116. "An affine-invariant active contour model (AI-snake) for model-based segmentation", Image and Vision Computing 16(2):135-146, 1998. [Horace H S Ip and Dinggang Shen]
  117. "Generalized affine invariant image normalization", IEEE Trans. on Pattern Analysis and Machine Intelligence (PAMI), 19(5):431-440, May 1997. [Dinggang Shen and Horace H S Ip]
  118. "A Hopfield neural network for adaptive image segmentation: an active surface paradigm", Pattern Recognition Letters, 18:37-48, 1997. [Dinggang Shen and Horace H S Ip]
  119. "Optimal axes for defining the orientations of shapes", IEE Electronic Letters, 32(20), 1873-1874, Sept. 1996. [Dinggang Shen and Horace H S Ip]
  120. "Edge orientation based active contour algorithm", Journal of Infrared and Millimeter Waves, 16(1):45-50, 1997. [Dinggang Shen and Feihu Qi]
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  123. "Method for indexing objects in video image", Journal of Computer Applications and Software, (accepted).
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  126. "Detection of arbitrary image orientation", Journal of Shanghai Jiao Tong University, 29(4), 1995.
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  128. "Probabilistic neural network based on the neighbor statistics character and its application in automatic target recognition", Journal of Infrared and Millimeter Waves, 14(1), 1995.
  129. "RGSA based moving target location", Journal of Radio Engineering, No.1, 1995.
  130. "Wavelet transform for rotation invariant image object recognition", Journal of PR&AI, Vo.8, No.1, 1995.
  131. "Method for orientation detection of rotationally symmetric image", Journal of PR&AI, Vol.8, No.4, 1995.
  132. "A location method of moving object from image sequence", Journal of Shanghai Jiao Tong University, 28(6), 1994.
  133. "Adaptive image segmentation by neural network", Journal of Shanghai Jiao Tong University, Vol.28 1994.
  134. "Invariant Image Recognition by Normalization", Journal of Shanghai Jiao Tong University, 28(3), 1994.
  135. "Liked-BAM neural network for image recognition ", Journal of Shanghai Jiao Tong University, 28(3), 1994.
  136. "A FDO neural network model and its application to image recognition", Journal of System Engineering & Electronics, 16(9):47-56,1994.
  137. "A learning method for associative memory model", Journal of PR&AI, Vol.7,No.1, March 1994.
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