Dr. Hongjun Jia

Personal Homepage: http://www.unc.edu/~jiahj/

Education:

• Ph.D., The Ohio State University, Columbus, Ohio, U.S.A., 2009
• M.E., Tsinghua University, Beijing, China, 2004
• B.E., Tsinghua University, Beijing, China, 2001

Research Interests: Computer Vision, Machine Learning, Medical Image Processing, Video Analysis and Coding

Software Download:

• The software package for ABSORB, an effective groupwise registration framework, is available free to download at NITRC and IDEA lab.
• The software package for MABMIS, a multi-atlas based multi-image segmentation method, is available free to download at NITRC and IDEA lab (soon).

Publications:

• Shu Liao, Hongjun Jia, Guorong Wu, and Dinggang Shen, " A Novel Framework for Longitudinal Atlas Construction with Groupwise Registration of Subject Image Sequences", accepted for NeuroImage.
• Hongjun Jia, Guorong Wu, Qian Wang, Minjeong Kim, Yaping Wang, and Dinggang Shen, "Directed Graph Based Image Registration'', accepted to MLMI, 2011.
• Hongjun Jia, Pew-Thian Yap, and Dinggang Shen, "Iterative Multi-Atlas-Based Multi-Image Segmentation with Tree-Based Registration", accepted for NeuroImage.
• Daoqiang Zhang, Guorong Wu, Hongjun Jia, and Dinggang Shen, "Confidence-Guided Sequential Label Fusion for Multi-Atlas Based Segmentation", in Proc. of MICCAI 2011, Toronto, Canada, Sep. 18-22, 2011.
• Guorong Wu, Hongjun Jia, Qian Wang, and Dinggang Shen, "SharpMean: Groupwise Registration Guided by Sharp Mean Image and Tree-based Registration", NeuroImage, Vol. 56, No. 4, pp. 1968-1981, 2011.

• Hongjun Jia, Guorong Wu, Qian Wang, Min-Jeong Kim, and Dinggang Shen, "iTree: Fast and Accurate Image Registration Based on the Combinative and Incremental Tree", in Proc. Of ISBI 2011, Chicago, IL, 2011.

• Feng Shi, Pew-Thian Yap, Guorong Wu, Hongjun Jia, John H. Gilmore, Weili Lin, and Dinggang Shen, "Infant Brain Atlases from Neonates to 1- and 2-year-olds", PLoS ONE 6(4): e18746, 2011.
• Shu Liao, Hongjun Jia, Guorong Wu, and Dinggang Shen, "A Novel Longitudinal Atlas Construction Framework by Groupwise Registration of Subject Image Sequences", in Proc. of IPMI 2011, Monastery Irsee, Germany, July 3-8, 2011.
• Hongjun Jia, Pew-Thian Yap, Guorong Wu, Qian Wang, and Dinggang Shen, "Intermediate Templates Guided Groupwise Registration of Diffusion Tensor Images", NeuroImage, Vol. 54, No. 2, pp. 928-939, 2011.
• Feng Shi, Guorong Wu, Pew-Thian Yap, Hongjun Jia, John H. Gilmore, Weili Lin, and Dinggang Shen, "Infant 0-1-2 Brain Atlases for MRI Segmentation and Normalization", in Proc. of ISMRM'11, Montreal, Quebec, Canada, May 7-13, 2011. (Abstract)
• Guorong Wu*, Hongjun Jia*, Qian Wang*, Feng Shi, Pew-Thian Yap, and Dinggang Shen, "Emergence of Groupwise Registration in MR Brain Study", The Biomedical Engineering Handbook, Fourth Edition, in press, 2011. (Invited Article, * equally contributed).
• Guorong Wu, Qian Wang, Hongjun Jia, and Dinggang Shen, "Feature-based Groupwise Registration by Hierarchical Anatomical Correspondence Detection," accepted to Human Brain Mapping, 2011.
• Hongjun Jia, Guorong Wu, Qian Wang, and Dinggang Shen, "ABSORB: Atlas Building by Self-Organized Registration and Bundling", NeuroImage, Vol. 51, No. 3, 1 July 2010, pp. 1057-1070. [free software]
• Qian Wang, Pew-Thian Yap, Hongjun Jia, Guorong Wu, and Dinggang Shen, "Hierarchical Fiber Clustering Based on Multi-Scale Neuroanatomical Features", in Proc. of MIAR 2010, LNCS 6326, pp. 448 - 456, Springer, Beijing, China, 2010.
• Guorong Wu, Qian Wang, Hongjun Jia, and Dinggang Shen, "Registration of Longitudinal Image Sequences with Implicit Template and Spatial-Temporal Heuristics", in Proc. of MICCAI 2010, Beijing, China, 2010.
• Guorong Wu, Hongjun Jia , Qian Wang, and Dinggang Shen, "Groupwise Registration with Sharp Mean", in Proc. of MICCAI 2010, Beijing, China, 2010.
• Guorong Wu, Qian Wang, Hongjun Jia, and Dinggang Shen, "Groupwise Registration by Hierarchical Anatomical Correspondence Detection", in Proc. of MICCAI 2010, Beijing, China, 2010.
• Hongjun Jia, Guorong Wu, Qian Wang , and Dinggang Shen, "ABSORB: Atlas Building by Self-Organized Registration and Bundling", in Proc. of the 23rd IEEE Conference on Computer Vision and Pattern Recognition (CVPR 2010), San Francisco, CA, 2010. [free software]
• Hongjun Jia and Aleix Martinez, "Low-Rank Matrix Fitting Based on Subspace Perturbation Analysis with Applications to Structure from Motion", IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 31, No. 5, pp. 841-854, 2009.
• Hongjun Jia and Aleix Martinez, "Support Vector Machines in Face Recognition with Occlusions", in Proc. of the 22nd IEEE Conference on Computer Vision and Pattern Recognition (CVPR 2009), Miami, FL, 2009.
• Hongjun Jia and Li Zhang,  "Directional Cross Diamond Search Algorithm for Fast Block Motion Estimation'', arXiv:0806.0689v1 [cs.CV], 2008.
• Hongjun Jia and Aleix Martinez, "Face Recognition with Occlusions in the Training and Testing Sets", in Proc. of the 8th IEEE International Conference on Automatic Face and Gesture Recognition (FG 2008), Amsterdam, The Netherlands, 2008.
• Hongjun Jia, Jeff Fortuna, and Aleix Martinez, "Perturbation Estimation of the Subspaces for Structure from Motion with Noisy and Missing Data", in Proc. of the Third International Symposium on 3D Data Processing, Visualization and Transmission (3DPVT 2006), pp. 1101-1107, Chapel Hill, NC, Jun. 2006. [NSF award, oral report]
• Hongjun Jia and Li Zhang, "A New Cross Diamond Search Algorithm for Block Motion Estimation", in Proc. of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2004), Vol. 3, pp. 357-360, Montreal, Quebec, Canada, May. 2004.
• Hongjun Jia and Li Zhang, "Directional Diamond Search Pattern for Fast Block Motion Estimation", IEE Electronics Letters, Vol. 39, No. 22, pp. 1581-1583, 30 Oct. 2003.
• Hongjun Jia and Li Zhang, "One-pixel Wide Edge Detection Algorithm Based on Local Accumulative Histogram", in Proc. of SPIE -The Second International Conference on Image and Graphics 2002 (ICIG 2002), Vol. 4875, pp. 283-90, Hefei, Anhui, China, Aug. 2002. [Oral report]

Last updated: July 26, 2011

Go to Hongjun Jia's personal page

Back to IDEA Group