IDEA Description

To aid in the retrieval of information from the RENCI Interaction Database for Experimental Analysis (IDEA), a set of tools have been developed to allow a user to query the database and to display the resultant interaction networks.

The current tools supplied are:

  • A tool for searching the database for the available homologues for a given set of genes.
  • A tool for creating a protein interaction network for a single species, or a derived interaction network based on another species.

    The interaction network output is formatted to allow direct visualization of the network using Cytoscape.

 

Project Team

    Xiaojun Guan (project lead)
    Dave Bowman

 

Acknowledgement for Support

This material is based upon work supported by the National Science Foundation under Grant No. CA SCI 0525308 and CSA SCI 0525308 through the University of Illinois-Urbana/Champaign.