Author: Robert Bagnell (, Pathology & Lab Med UNC-CH

History: 2010/11/01: First Version

Requires: ImageJ 1.30m or newer


Installation: Download StackAverage_16.class to the plugins folder and restart ImageJ

Description: Calculates the average values of pixels located at the same position in each slice of the stack and makes a new image showing the average values. The plugin requires a stack of 16-bit images.

This plugin is based on the plugin StackAverage, an example plugin from the ImageJ plugin writing tutorial previously located at

Download Stack Average 16 package as Zip

These files are provided for use under Open Software License v. 3.0 (OSL-3.0) Downloading or using any of these files constitutes your acceptance of the licensing agreement.