MiniMUGA Sample Report

MiniMUGA Sample Report - V2

Sample ID

MMRRC_C57BL/6-Tg(APOE-SCARB1*)13Arem/Mmnc_M26140

Neogen ID

FG5358

MMRRC Strain ID

41572

MMRRC Strain Name

C57BL/6-Tg(APOE-SCARB1*)13Arem/Mmnc

Summary

The genotype of this sample is of excellent quality. It is male and inbred, and likely a C57BL/6NTac mouse.

Diagnostic SNPs indicate the presence of the background strain groups C57BL/6.

No genetic constructs were detected in this sample.

Genotyping Quality

Excellent (24 N calls)
All reported results are dependent on genotyping quality.

Chromosomal Sex

Inbreeding Estimate

Inbred (7 H calls at autosomal, X, and PAR chromosome markers)

Inbreeding and
Genotyping Quality
(Plot)

Constructs Detected

BlastR	bpA	Cas9	chlor	Cre	DTA	g_FP	hCMV_a	hCMV_b	hTK_pr	iCre	IRES	Luc	r_FP	rtTA	SV40	tTA
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Primary Background
(Autosomes,
X Chromosome)

Strain	Total	Consistent	Inconsistent	Heterozygous	Excluded
C57BL/6NTac	8911	8760 (100.0%)	1 (0.0%)	3 (0.0%)	147

Secondary Background
(Autosomes,
X Chromosome)

Not Applicable

Y Chromosome

Y Haplogroup 12 - 100.0% Consistent
Includes C57BL/6NTac and 20 other strains

MT Chromosome

MT Haplogroup 1 - 100.0% Consistent
Includes C57BL/6NTac and 161 other strains

Background Ideogram

Backgrounds Detected
(Diagnostic Alleles)

Strain Group	Homozygous	Heterozygous	Potential	% Observed
C57BL/6 (C57BL/6NCrl, C57BL/6NHsd, C57BL/6NJ, C57BL/6NRj, C57BL/6NTac)	12	2	21	66.7%

Refined Analysis

Background	Informative Markers	Informative Markers %	Genomic Region %
C57BL/6NTac	8760	100.0%	100.0%
Heterozygous	0	0.0%	0.0%
Unexplained Homozygous	0	0.0%	0.0%
Unexplained Heterozygous	3	0.0%	0.0%
Total	8763	100.0%	100.0%

Refined Ideogram

Notes

The report is consistent with the SDS. The mouse is inbred C57BL/6NTac at MiniMUGA resolution level.