MiniMUGA Sample Report

MiniMUGA Sample Report - V2

Sample ID

MMRRC_B6NTac.Cg-Tg(Lck-cre)1Cwi/Mmnc_M7420

Neogen ID

QZ1372

MMRRC Strain ID

37396

MMRRC Strain Name

B6NTac.Cg-Tg(Lck-cre)1Cwi/Mmnc

Summary

The genotype of this sample is of excellent quality. It is male and inbred, and likely a C57BL/6NTac mouse.

Diagnostic SNPs indicate the presence of the background strain groups C57BL/6.

The sample contains the following genetic constructs: Cre recombinase

Genotyping Quality

Excellent (4 N calls)
All reported results are dependent on genotyping quality.

Chromosomal Sex

Inbreeding Estimate

Inbred (4 H calls at autosomal, X, and PAR chromosome markers)

Inbreeding and
Genotyping Quality
(Plot)

Constructs Detected

BlastR	bpA	Cas9	chlor	Cre	DTA	g_FP	hCMV_a	hCMV_b	hTK_pr	iCre	IRES	Luc	r_FP	rtTA	SV40	tTA
-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Primary Background
(Autosomes,
X Chromosome)

Strain	Total	Consistent	Inconsistent	Heterozygous	Excluded
C57BL/6NTac	8911	8779 (100.0%)	4 (0.0%)	0 (0.0%)	128

Secondary Background
(Autosomes,
X Chromosome)

Not Applicable

Y Chromosome

Y Haplogroup 12 - 100.0% Consistent
Includes C57BL/6NTac and 20 other strains

MT Chromosome

MT Haplogroup 1 - 100.0% Consistent
Includes C57BL/6NTac and 161 other strains

Background Ideogram

Backgrounds Detected
(Diagnostic Alleles)

Strain Group	Homozygous	Heterozygous	Potential	% Observed
C57BL/6 (C57BL/6NCrl, C57BL/6NHsd, C57BL/6NJ, C57BL/6NRj, C57BL/6NTac)	14	0	21	66.7%

Refined Analysis

Background	Informative Markers	Informative Markers %	Genomic Region %
C57BL/6NTac	8779	100.0%	100.0%
Heterozygous	0	0.0%	0.0%
Unexplained Homozygous	0	0.0%	0.0%
Unexplained Heterozygous	0	0.0%	0.0%
Total	8779	100.0%	100.0%

Refined Ideogram

Notes

The report agrees with the SDS. The mouse is inbred C57BL6/N at MiniMUGA resolution level. The presence of the Cre construct is detected.