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A Windows 10 workstation custom-designed for advanced image visualization and processing. It is ideally suited for processing and analysis of large data sets including light sheet imaging data, neuron tracing (semi- and fully automated options), and co-localization and segmentation of cells or sub-cellular components.

Location: 5114 MEJ

Image Analysis | Deconvolution | Segmentation | Neuron Tracing

  • Operating System: Windows 10
  • Software: 
    • Imaris and Imaris Stitcher (Bitplane) – Full License with Support
    • Olympus FV3000 confocal and cellSens – with Stitching and 3D Deconvolution
    • Zeiss Zen Blue and Black – with Stitching
    • Neurolucida 10
    • Cell Profiler
    • Fiji/ImageJ
  • Hardware:
    • 12 Core 3.0 GHz CPU,
    • 512 GB DDR4-2133 Ram
    • PNY Quadro P6000 24 GB GPU
    • 2 NVIDIA Tesla K40 12 GB GPUs

A Linux CentOS 7 workstation custom designed for machine learning and multi-threading algorithms. It is ideally suited for running complex programs which typically require cloud computing and is accessible by multiple users simultaneously by remote login.

Location: 5114 MEJ

Image Analysis | 3D Behavior Analysis| High Content Imaging Analysis | Machine Learning

  • Operating System: Linux CentOS 7
  • Software: 
    • iRODs server
    • Python
    • Docker
    • Singularity
  • Hardware:
    • 14 Core 2.6 GHz CPU
    • 512 GB DDR4-2400 Ram
    • 4 GeForce GTX 1080 Ti 11 GB GPUs