{"id":144,"date":"2018-05-21T13:15:25","date_gmt":"2018-05-21T17:15:25","guid":{"rendered":"https:\/\/med.sites.unc.edu\/vironomics\/core-sequencing-qc\/"},"modified":"2018-05-21T13:15:35","modified_gmt":"2018-05-21T17:15:35","slug":"core-sequencing-qc","status":"publish","type":"post","link":"https:\/\/www.med.unc.edu\/vironomics\/core-sequencing-qc\/","title":{"rendered":"Core sequencing QC"},"content":{"rendered":"<p><!-- description --><\/p>\n<p class=\"lead\">Quality Control plots for sequencing runs done in house by Vironomics Core&#8217;s on the Ion Torrent S5<\/p>\n<div class=\"image-section\"><\/div>\n<p><em>\u00a0<\/em><\/p>\n<figure id=\"attachment_515\" class=\"thumbnail wp-caption alignleft\" style=\"width: 1034px\"><a href=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL.png\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-515 size-large\" src=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL-1024x439.png\" alt=\"\" width=\"1024\" height=\"439\" srcset=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL-1024x439.png 1024w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL-150x64.png 150w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL-300x129.png 300w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_ModeRead_20180514_JL-768x329.png 768w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/a><figcaption class=\"caption wp-caption-text\">Ion Torrent S5 Read Length<\/figcaption><\/figure>\n<p><em>\u00a0<\/em><\/p>\n<hr \/>\n<hr \/>\n<figure id=\"attachment_516\" class=\"thumbnail wp-caption alignleft\" style=\"width: 1034px\"><a href=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-large wp-image-516\" src=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads-1024x439.png\" alt=\"\" width=\"1024\" height=\"439\" srcset=\"https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads-1024x439.png 1024w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads-150x64.png 150w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads-300x129.png 300w, https:\/\/www.med.unc.edu\/vironomics\/wp-content\/uploads\/sites\/504\/2017\/12\/S5_NumReads-768x329.png 768w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/a><figcaption class=\"caption wp-caption-text\">Ion Torrent S5 Number of Reads per run by sample type<\/figcaption><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>Quality Control plots for sequencing runs done in house by Vironomics Core&#8217;s on the Ion Torrent S5 \u00a0 \u00a0<\/p>\n","protected":false},"author":33839,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":"","_links_to":"","_links_to_target":""},"categories":[1],"tags":[],"class_list":["post-144","post","type-post","status-publish","format-standard","hentry","category-news","odd"],"acf":[],"featured_image":false,"featured_image_medium":false,"featured_image_medium_large":false,"featured_image_large":false,"featured_image_thumbnail":false,"featured_image_alt":false,"category_details":[{"name":"News","link":"https:\/\/www.med.unc.edu\/vironomics\/category\/news\/"}],"tag_details":[],"_links_to":[],"_links_to_target":[],"_links":{"self":[{"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/posts\/144","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/users\/33839"}],"replies":[{"embeddable":true,"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/comments?post=144"}],"version-history":[{"count":0,"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/posts\/144\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/media?parent=144"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/categories?post=144"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.med.unc.edu\/vironomics\/wp-json\/wp\/v2\/tags?post=144"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}