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Publications

Publications authored through support of

  1. Detecting large copy number variants using exome genotyping arrays in a large Swedish schizophrenia sample. Szatkiewicz JP, Neale BM, O’Dushlaine C, Fromer M, Goldstein JI, Moran JL, Chambert K, Kahler A, Magnusson PK, Hultman CM, Sklar P, Purcell S, McCarroll SA, Sullivan PF. Molecular Psychiatry. 2013 Nov;18(11):1178-84. PubMed | Journal
  2. The Genomics of Schizophrenia: Update and Implications, Paola Giusti-Rodriguez and Patrick F. Sullivan. Journal of Clinical Investigation. 2013 November:123:11 (4557-63). PubMed | Journal
  3. Assessment of gene expression in peripheral blood using RNAseq before and after weight restoration in anorexia nervosa, Kim Y, Trace SE, Crowley JJ, Brownley KA, Hamer RM, Pisetsky DS, Sullivan PF, Bulik CM. Psychiatry Res. 2013 Jun 15. PubMed | Journal
  4. Comprehensive analysis of copy number variation in monozygotic twins discordant for bipolar disorder or schizophrenia. Bloom RJ, Kähler AK, Collins AL, Chen G, Cannon TD, Hultman C, Sullivan PF. Schizophr Res. 2013 May;146(1-3):289-90. PubMed | Journal
  5. Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. Cross-disorder Group of the Psychiatric Genomics Consortium, Smoller JW, Craddock N, Kendler K, Lee PH, Neale BM, Nurnberger JI, Ripke S, Santangelo S, Sullivan PF. Lancet. 2013 Apr 20;381(9875):1371-9. PubMed | Journal
  6. A mega-analysis of genome-wide association studies for major depressive disorder. A Major Depressive Disorder Working Group of the Psychiatric GWAS Consortium, Ripke S, Wray NR, Lewis CM, Hamilton SP, Weissman MM, Breen G, Byrne EM, Blackwood DH, Boomsma DI, Cichon S, Heath AC, Holsboer F, Lucae S, Madden PA, Martin NG, McGuffin P, Muglia P, Noethen MM, Penninx BP, Pergadia ML, Potash JB, Rietschel M, Lin D, Müller-Myhsok B, Shi J, Steinberg S, Grabe HJ, Lichtenstein P, Magnusson P, Perlis RH, Preisig M, Smoller JW, Stefansson K, Uher R, Kutalik Z, Tansey KE, Teumer A, Viktorin A, Barnes MR, Bettecken T, Binder EB, Breuer R, Castro VM, Churchill SE, Coryell WH, Craddock N, Craig IW, Czamara D, De Geus EJ, Degenhardt F, Farmer AE, Fava M, Frank J, Gainer VS, Gallagher PJ, Gordon SD, Goryachev S, Gross M, Guipponi M, Henders AK, Herms S, Hickie IB, Hoefels S, Hoogendijk W, Hottenga JJ, Iosifescu DV, Ising M, Jones I, Jones L, Jung-Ying T, Knowles JA, Kohane IS, Kohli MA, Korszun A, Landen M, Lawson WB, Lewis G, Macintyre D, Maier W, Mattheisen M, McGrath PJ, McIntosh A, McLean A, Middeldorp CM, Middleton L, Montgomery GM, Murphy SN, Nauck M, Nolen WA, Nyholt DR, O’Donovan M, Oskarsson H, Pedersen N, Scheftner WA, Schulz A, Schulze TG, Shyn SI, Sigurdsson E, Slager SL, Smit JH, Stefansson H, Steffens M, Thorgeirsson T, Tozzi F, Treutlein J, Uhr M, van den Oord EJ, Van Grootheest G, Völzke H, Weilburg JB, Willemsen G, Zitman FG, Neale B, Daly M, Levinson DF, Sullivan PF. Mol Psychiatry. . 2013 Apr;18(4):497-511. PubMed |Journal
  7. Improving detection of copy-number variation by simultaneous bias correction and read-depth segmentation. Szatkiewicz JP, Wang W, Sullivan PF, Wang W, Sun W. Nucleic Acids Res. 2013 Feb 1;41(3):1519-32. PubMed | Journal
  8. Genome-wide association studies in psychiatry: what have we learned? Collins AL, Sullivan PF. Br J Psychiatry. 2013 Jan;202(1):1-4. PubMed | Journal
  9. Non-random mating, parent-of-origin, and maternal-fetal incompatibility effects in schizophrenia. Kim Y, Ripke S, Kirov G, Sklar P, Purcell SM, Owen MJ, O’Donovan MC, Sullivan PF. Schizophr Res. . 2013 Jan;143(1):11-7. PubMed | Journal
  10. Family history of schizophrenia and bipolar disorder as risk factors for autism. Sullivan PF, Magnusson C, Reichenberg A, Boman M, Dalman C, Davidson M, Fruchter E, Hultman CM, Lundberg M, Långström N, Weiser M, Svensson AC, Lichtenstein P. Arch Gen Psychiatry. 2012 Nov;69(11):1099-1103. PubMed | Journal | Press release
  11. Puzzling over schizophrenia: schizophrenia as a pathway disease. Sullivan PF. Nat Med. . 2012 Feb 6;18(2):210-1. PubMed | Journal | Press release
  12. Genetic architectures of psychiatric disorders: the emerging picture and its implications. Sullivan PF, Daly MJ, O’Donovan M. Nat Rev Genet. 2012 Jul10;13(8):537-51. PubMed | Journal

Publications authored by members of the PGC (Psychiatric Genomic Consortium)

  1. Reciprocal Duplication of the Williams-Beuren Syndrome Deletion on Chromosome 7q11.23 Is Associated with Schizophrenia. Mulle JG, Pulver AE, McGrath JA, Wolyniec PS, Dodd AF, Cutler DJ, Sebat J, Malhotra D, Nestadt G, Conrad DF, Hurles M, Barnes CP, Ikeda M, Iwata N, Levinson DFF, Gejman PV, Sanders AR, Duan J, Mitchell AA, Peter I, Sklar P, O’Dushlaine CT, Grozeva D, O’Donovan MC, Owen MJ, Hultman CM, Kähler AK, Sullivan PF, The Molecular Genetics of Schizophrenia Consortium, Kirov G, Warren ST. Biol Psychiatry. 2013 Jul 17. PubMed | Journal
  2. The EPDS-Lifetime: assessment of lifetime prevalence and risk factors for perinatal depression in a large cohort of depressed women. Meltzer-Brody S, Boschloo L, Jones I, Sullivan PF, Penninx BW. Arch Womens Ment Health. 2013, Aug 1. PubMed | Journal
  3. Biclustering with Heterogeneous Variance. Chen G, Sullivan PF, Kosorok MR. Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12253-8. PubMed | Journal | Press Release This work describes the development of a new data-mining tool that will improve researchers’ understanding of cancer genetics.
  4. A comprehensive family-based replication study of schizophrenia genes. Aberg KA, Liu Y, Bukszár J, McClay JL, Khachane AN, Andreassen OA, Blackwood D, Corvin A, Djurovic S, Gurling H, Ophoff R, Pato CN, Pato MT, Riley B, Webb T, Kendler K, O’Donovan M, Craddock N, Kirov G, Owen M, Rujescu D, St Clair D, Werge T, Hultman CM, Delisi LE, Sullivan P, van den Oord EJ. JAMA Psychiatry. 2013 Jun;70(6):573-81. PubMed | Journal | Press release
  5. All SNPs are not created equal: genome-wide association studies reveal a consistent pattern of enrichment among functionally annotated SNPs. Schork AJ, Thompson WK, Pham P, Torkamani A, Roddey JC, Sullivan PF, Kelsoe JR, O’Donovan MC, Furberg H; Tobacco and Genetics Consortium; Bipolar Disorder Psychiatric Genomics Consortium; Schizophrenia Psychiatric Genomics Consortium, Schork NJ, Andreassen OA, Dale AM. PLoS Genet. 2013 Apr;9(4). PubMed | Journal
  6. MethylPCA: a toolkit to control for confounders in methylome-wide association studies. Chen W, Gao G, Nerella S, Hultman CM, Magnusson PK, Sullivan PF, Aberg KA, van den Oord EJ. BMC Bioinformatics. 2013 Mar 2;14:74. PubMed | Journal
  7. Genotype-based ancestral background consistently predicts efficacy and side effects across treatments in CATIE and STAR*D. Adkins DE, Souza RP, Aberg K, Clark SL, McClay JL, Sullivan PF, van den Oord EJ. PLoS One. . 2013;8(2). PubMed | Journal
  8. No effect of genome-wide copy number variation on measures of intelligence in a New Zealand birth cohort. Bagshaw AT, Horwood LJ, Liu Y, Fergusson DM, Sullivan PF, Kennedy MA. PLoS One. 2013;8(1). PubMed | Journal
  9. Implication of a rare deletion at distal 16p11.2 in schizophrenia. Guha S, Rees E, Darvasi A, Ivanov D, Ikeda M, Bergen SE, Magnusson PK, Cormican P, Morris D, Gill M, Cichon S, Rosenfeld JA, Lee A, Gregersen PK, Kane JM, Malhotra AK, Rietschel M, Nöthen MM, Degenhardt F, Priebe L, Breuer R, Strohmaier J, Ruderfer DM, Moran JL, Chambert KD, Sanders AR, Shi J, Kendler K, Riley B, O’Neill T, Walsh D, Malhotra D, Corvin A, Purcell S, Sklar P, Iwata N, Hultman CM, Sullivan PF, Sebat J, McCarthy S, Gejman PV, Levinson DF, Owen MJ, O’Donovan MC, Lencz T, Kirov G; Molecular Genetics of Schizophrenia Consortium; Wellcome Trust Case Control Consortium 2. JAMA Psychiatry. . 2013 Mar;70(3):253-60. PubMed | Journal
  10. Increased risk of major depression by childhood abuse is not modified by CNR1 genotype. Pearson JF, Fergusson DM, Horwood LJ, Miller AL, Sullivan PF, Youfang LE, Kennedy MA. Am J Med Genet B Neuropsychiatr Genet. 2013 Mar;162B(2):224-6. PubMed | Journal
  11. Genetic schizophrenia risk variants jointly modulate total brain and white matter volume. Terwisscha van Scheltinga AF, Bakker SC, van Haren NE, Derks EM, Buizer-Voskamp JE, Boos HB, Cahn W, Hulshoff Pol HE, Ripke S, Ophoff RA, Kahn RS; Psychiatric Genome-wide Association Study Consortium. Biol Psychiatry. 2013 Mar 15;73(6):525-31. PubMed | Journal
  12. Improved detection of common variants associated with schizophrenia by leveraging pleiotropy with cardiovascular-disease risk factors. Andreassen OA, Djurovic S, Thompson WK, Schork AJ, Kendler KS, O’Donovan MC, Rujescu D, Werge T, van de Bunt M, Morris AP, McCarthy MI; International Consortium for Blood Pressure GWAS; Diabetes Genetics Replication and Meta-analysis Consortium; Psychiatric Genomics Consortium Schizophrenia Working Group, Roddey JC, McEvoy LK, Desikan RS, Dale AM. Am J Hum Genet. 2013 Feb 7;92(2):197-209. PubMed | Journal
  13. Genome-wide association study of patient-rated and clinician-rated global impression of severity during antipsychotic treatment. Clark SL, Souza RP, Adkins DE, Aberg K, Bukszár J, McClay JL, Sullivan PF, van den Oord EJ. Pharmacogenet Genomics. 2013 Feb;23(2):69-77. PubMed | Journal
  14. Mosaic copy number variation in schizophrenia. Ruderfer DM, Chambert K, Moran J, Talkowski M, Chen ES, Gigek C, Gusella JF, Blackwood DH, Corvin A, Gurling HM, Hultman CM, Kirov G, Magnusson P, O’Donovan MC, Owen MJ, Pato C, St Clair D, Sullivan PF, Purcell SM, Sklar P, Ernst C. Eur J Hum Genet. 2013 Jan 16. PubMed | Journal
  15. MBD-seq as a cost-effective approach for methylome-wide association studies: demonstration in 1500 case–control samples. Aberg KA, McClay JL, Nerella S, Xie LY, Clark SL, Hudson AD, Bukszár J, Adkins D, Consortium SS, Hultman CM, Sullivan PF, Magnusson PK, van den Oord EJ. Epigenomics. 2012 Dec;4(6):605-21. PubMed | Journal
  16. Multivariate phenotype association analysis by marker-set kernel machine regression. Maity A, Sullivan PF, Tzeng JY. Genet Epidemiol. 2012 Nov;36(7):686-95. PubMed | Journal
  17. Discovery and statistical genotyping of copy-number variation from whole-exome sequencing depth. Fromer M, Moran JL, Chambert K, Banks E, Bergen SE, Ruderfer DM, Handsaker RE, McCarroll SA, O’Donovan MC, Owen MJ, Kirov G, Sullivan PF, Hultman CM, Sklar P, Purcell SM. Am J Hum Genet. 2012 Oct 5;91(4):597-607. PubMed | Journal
  18. Quantitative analysis of focused a-to-I RNA editing sites by ultra-high-throughput sequencing in psychiatric disorders. Zhu H, Urban DJ, Blashka J, McPheeters MT, Kroeze WK, Mieczkowski P, Overholser JC, Jurjus GJ, Dieter L, Mahajan GJ, Rajkowska G, Wang Z, Sullivan PF, Stockmeier CA, Roth BL. PLoS One. 2012;7(8). PubMed | Journal
  19. zCall: a rare variant caller for array-based genotyping: genetics and population analysis. Goldstein JI, Crenshaw A, Carey J, Grant GB, Maguire J, Fromer M, O’Dushlaine C, Moran JL, Chambert K, Stevens C; Swedish Schizophrenia Consortium; ARRA Autism Sequencing Consortium, Sklar P, Hultman CM, Purcell S, McCarroll SA, Sullivan PF, Daly MJ, Neale BM. Bioinformatics. 2012 Oct 1;28(19):2543-5. PubMed |Journal