Deprecated Software
UNCCorticalThickness | UNC Cortical Thickness Analysis based on ITK | |
ShapeTools (SPHARM shape analysis) | The SPHARM shape analysis toolset is used for doing local statistical shape analysis. ITK based. | |
FiberTracking | The FT tool is a cross-platform system to explore diffusion tensor images and to reconstruct fiber tracts: Platform independent Fiber tracts between ROI FA and ADC generation |
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DTIChecker | DTIChecker is a program to check and correct DTI images Slice artifacts detection Motion artifacts detection and correction Average creation |
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MeshValmet | MeshValmet surface difference evaluation tool | |
itkEMS | itkEMS is a program to segment brain tissue Multi channel support Fast EM segmentation XML support for parameters |
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FiberViewer | Fiber Viewer is a program to analyze fibers extracted from the Fiber Tracking tool. It provides: Several methods for clustering Tools for manipulate fibers Methods to analyse FA and ADC along fibers |
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Imagine | Program which create dynamic pipeline Up to 20 filters (included affine registration and fluid warping) Easy to use and to parametrize Wizard assistant for running pipeline automatically |
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IntensityRescaler | Program which rescale image in intensity Intensity rescaling based on segmentation User can define regions dynamically Automatic transfert function generation |
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DofView | DofView is a tool used to analysis Deformation Field created by the WarpTool or AtlasBuilder software. Several measurement: Jacobian, Divergence … Convert Linux/Solaris DoF to Windows (Imagine) DOF 3D display of the deformation field |
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Byu2vox | Byu2Vox is a program that convert a BYU surface to a voxel volume. Specification of the bounding box Multi-images processing (batch mode) |
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Iris | IRIS is intended help doctors to create 3D models of structures within the brain: Displays the data in 4 windows. Build a 3D model of a structure from any volumetric data set Drawing tools |
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Snap | Snake Automatic Partitioning: Region-probability snake (competition snake). Propagation snake stopping at region discontinuities. Region of interest painting. |
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Valmet | Valmet is a tool to improve segmentations. Valmet used several algorithms to compare segmentations in 2D and 3D: Complex algortihms implemented Dynamic 2D and 3D vizualisation Differences color display along the surface |
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Imconvert | Program which convert .gipl .hdr .raw . v0 .mha images Select input/output type Select patient orientation Graphic user interface (very usefull under Windows) |