Department of Genetics Publications for July 7th – 20th, 2024

Department of Genetics faculty, postdocs, students and collaborators published 16 papers during July 7th – 20th, 2024.

Initiator cell death event induced by SARS-CoV-2 in the human airway epithelium. 

Liang K, Barnett KC, Hsu M, Chou WC, Bais SS, Riebe K, Xie Y, Nguyen TT, Oguin TH 3rd, Vannella KM, Hewitt SM, Chertow DS, Blasi M, Sempowski GD, Karlsson A, Koller BH, Lenschow DJ, Randell SH, Ting JP.

Sci Immunol. 2024 Jul 12;9(97):eadn0178. doi: 10.1126/sciimmunol.adn0178. Epub 2024 Jul 12.

PMID: 38996010

 

Comparative biological activity of palbociclib and ribociclib in hormone receptor-positive breast cancer. 

Lorman-Carbó N, Martínez-Sáez O, Fernandez-Martinez A, Galván P, Chic N, Garcia-Fructuoso I, Rodríguez A, Gómez-Bravo R, Schettini F, Blasco P, Castillo O, González-Farré B, Adamo B, Vidal M, Muñoz M, Perou CM, Malumbres M, Gavilá J, Pascual T, Prat A, Brasó-Maristany F.

Sci Rep. 2024 Jul 11;14(1):16030. doi: 10.1038/s41598-024-67126-2.

PMID: 38992220 Free PMC article.

 

SnapFISH-IMPUTE: an imputation method for multiplexed DNA FISH data. 

Yu H, Wu D, Mishra S, Shen G, Sun H, Hu M, Li Y.

Commun Biol. 2024 Jul 9;7(1):834. doi: 10.1038/s42003-024-06428-7.

PMID: 38982263 Free PMC article.

 

Ensuring Successful Biomarker Studies in Bladder Preservation Clinical Trials for Non-muscle Invasive Bladder Cancer. 

McConkey DJ, Baumann BC, Cooper Greenberg S, DeGraff DJ, Delacroix SE, Efstathiou JA, Foster J, Groshen S, Kadel EE, Khani F, Kim WY, Lerner SP, Levin T, Liao JC, Milowsky MI, Meeks JJ, Miyamoto DT, Mouw KW, Pietzak EJ, Solit DB, Sundi D, Tawab-Amiri A, West PJ, Wobker SE, Wyatt AW, Apolo AB, Black PC.

Bladder Cancer. 2024 Mar 12;10(1):1-8. doi: 10.3233/BLC-230082. eCollection 2024.

PMID: 38993535 Free PMC article. No abstract available.

 

Structural and genetic diversity in the secreted mucins MUC5AC and MUC5B. 

Plender EG, Prodanov T, Hsieh P, Nizamis E, Harvey WT, Sulovari A, Munson KM, Kaufman EJ, O’Neal WK, Valdmanis PN, Marschall T, Bloom JD, Eichler EE.

Am J Hum Genet. 2024 Jul 3:S0002-9297(24)00213-1. doi: 10.1016/j.ajhg.2024.06.007. Online ahead of print.

PMID: 38991590

 

Early Life Cardiovascular Risk Factors and Midlife Epigenetic Aging: An Enduring Legacy. 

de Vries PS, Zannas AS.

JACC Basic Transl Sci. 2024 May 27;9(5):591-592. doi: 10.1016/j.jacbts.2024.02.006. eCollection 2024 May.

PMID: 38984039 Free PMC article.

 

Challenging the Boundaries Between Treatment, Prevention, and Enhancement in Human Genome Editing. 

Waltz M, Walker RL, Flatt MA, MacKay D, Conley JM, Juengst ET, Cadigan RJ.

CRISPR J. 2024 Jul 8. doi: 10.1089/crispr.2024.0021. Online ahead of print.

PMID: 38976494

 

Eye-brain connections revealed by multimodal retinal and brain imaging genetics. 

Zhao B, Li Y, Fan Z, Wu Z, Shu J, Yang X, Yang Y, Wang X, Li B, Wang X, Copana C, Yang Y, Lin J, Li Y, Stein JL, O’Brien JM, Li T, Zhu H.

Nat Commun. 2024 Jul 18;15(1):6064. doi: 10.1038/s41467-024-50309-w.

PMID: 39025851

 

Differences in 21-Gene and PAM50 Recurrence Scores in Younger and Black Women With Breast Cancer. 

Van Alsten SC, Vohra SN, Ivory JM, Hamilton AM, Gao X, Kirk EL, Butler EN, Earp HS, Reeder-Hayes KE, Hoadley KA, Carey LA, Troester MA.

JCO Precis Oncol. 2024 Jul;8:e2400137. doi: 10.1200/PO.24.00137.

PMID: 39013134

 

Assessing Etiologic Heterogeneity for Multinomial Outcome with Two-Phase Outcome-Dependent Sampling Design. 

Reifeis SA, Hudgens MG, Troester MA, Love MI.

Am J Epidemiol. 2024 Jul 16:kwae212. doi: 10.1093/aje/kwae212. Online ahead of print.

PMID: 39010753

 

Visual Intratumor Heterogeneity and Breast Tumor Progression. 

Li Y, Van Alsten SC, Lee DN, Kim T, Calhoun BC, Perou CM, Wobker SE, Marron JS, Hoadley KA, Troester MA.

Cancers (Basel). 2024 Jun 21;16(13):2294. doi: 10.3390/cancers16132294.

PMID: 39001357 Free PMC article.

 

APC/C prevents a noncanonical order of cyclin/CDK activity to maintain CDK4/6 inhibitor-induced arrest. 

Mouery BL, Baker EM, Mei L, Wolff SC, Mills CA, Fleifel D, Mulugeta N, Herring LE, Cook JG.

Proc Natl Acad Sci U S A. 2024 Jul 23;121(30):e2319574121. doi: 10.1073/pnas.2319574121. Epub 2024 Jul 18.

PMID: 39024113

 

Type II innate lymphoid cell plasticity contributes to impaired reconstitution after allogeneic hematopoietic stem cell transplantation. 

Laurie SJ, Foster JP 2nd, Bruce DW, Bommiasamy H, Kolupaev OV, Yazdimamaghani M, Pattenden SG, Chao NJ, Sarantopoulos S, Parker JS, Davis IJ, Serody JS.

Nat Commun. 2024 Jul 17;15(1):6000. doi: 10.1038/s41467-024-50263-7.

PMID: 39019846 Free PMC article.

 

Community consensus for Heparan sulfate as a biomarker to support accelerated approval in Neuronopathic Mucopolysaccharidoses. 

Muenzer J, Ho C, Lau H, Dant M, Fuller M, Boulos N, Dickson P, Ellinwood NM, Jones SA, Zanelli E, O’Neill C.

Mol Genet Metab. 2024 Jul 10;142(4):108535. doi: 10.1016/j.ymgme.2024.108535. Online ahead of print.

PMID: 39018614 Review.

 

Glucagon Receptor Antagonist for Heart Failure With Preserved Ejection Fraction. 

Gao C, Xiong Z, Liu Y, Wang M, Wang M, Liu T, Liu J, Ren S, Cao N, Yan H, Drucker DJ, Rau CD, Yokota T, Huang J, Wang Y.

Circ Res. 2024 Jul 16. doi: 10.1161/CIRCRESAHA.124.324706. Online ahead of print.

PMID: 39011638

 

Highly Contiguous Genome Assembly of Drosophila prolongata – a Model for Evolution of Sexual Dimorphism and Male-specific Innovations. 

Luecke D, Luo Y, Krzystek H, Jones C, Kopp A.

G3 (Bethesda). 2024 Jul 13:jkae155. doi: 10.1093/g3journal/jkae155. Online ahead of print.

PMID: 39001868