Publications
- Ciccone EJ, Zhu DR, Gunderson AK, Hawke S, Ajeen R, Lodge EK, Shook-Sa BE, Abernathy H, Garrett HE, King E, Alavian N, Reyes R, Taylor JL, Beatty C, Chung C, Mendoza CE, Weber DJ, Markmann AJ, Premkumar L, Juliano JJ, Boyce RM, Aiello AE, 2024. “Magnitude and Durability of the Antibody Response to mRNA-Based Vaccination Among SARS-CoV-2 Seronegative and Seropositive Health Care Personnel.” Open Forum Infect Dis, 11(1):ofae009. doi: 10.1093/ofid/ofae009. PMC10826795
- Clutton GT, Weideman AM, Mischell MA, Kallon S, Conrad SZ, Shaw FR, Warren JA, Lin L, Kuruc JD, Xu Y, Gay CM. CD3 downregulation identifies high-avidity human CD8 T cells. Clinical and Experimental Immunology. 2024 Mar 1;215(3):279-90. PMC10876116
- Cole SR, Shook-Sa BE, Zivich PN, Edwards JK, Richardson DB, Hudgens MG, 2024. “Higher-order evidence.” European Journal of Epidemiology. 39(1):1-11. PMID: 38195955.
- Council O, Tyers L, Moeser M, Sondgeroth A, Spielvogel E, Richardson B, Doolabh D, Zhou S, Emery A, Archin N, Shook-Sa B, Margolis D, Karim SA, Pond SK, Garrett N, Abrahams M, Joseph S, Williamson C, Swanstrom R. “The Persistent Pool of HIV-1-infected Cells is Formed Episodically During Untreated Infection.” Journal of Virology. Accepted.
- Devanathan AS, Poliseno AJ, White NR, Schauer AP, Sykes C, Weideman AMK, Kilpatrick KW, Hudgens MG, Gay CL, Rosen EP, Dumond JB, Kashuba ADM, Cottrell ML. A Cross-Biomeasure Study to Optimize Antiretroviral Adherence Estimation. JAIDS J Acquir Immune Defic Syndr. November 21, 2024.
- Edwards JK, Breger TL, Cole SR, Zivich PN, Shook-Sa BE, Sadinski LM, Westreich D. Edmonds A, Ramirez C, Ofotokun I, Kassaye S, Brown T, Konkle-Parker D, Stosor V, Bolan R, Krier S, Jones DL, D’Souza G, Cohen M, Tien P, Taylor T, Anastos K, Drummond MB, Floris-Moore M. “Right censoring and mortality in the Multicenter AIDS Cohort Study and Women’s Interagency HIV Study.” Epidemiology. Accepted.
- Edwards JK, Cole SR, Zivich PN, Hudgens MG, Breger TL, Shook-Sa BE (2024). “Semiparametric g-computation for survival outcomes with time-fixed exposures: an illustration.” Annals of Epidemiology. 96: 24-31. PMC11283356
- Graybill LA, Chi BH, Hamoonga TE, Kasaro M, Hodges JN, Richardson BD, Bissram JS, Saidi F, Mollan KR, Freeborn K, Rosenberg NE. Predictors of maternal HIV acquisition during pregnancy and lactation in sub-Saharan Africa: A systematic review and narrative synthesis. PloS One. 2024 Dec 3;19(12):e0314747.
- Graybill LA, McKay CN, Wang J, Sam-Agudu NA, Yotebieng M, Saidi F, Bekker LG, Shook-Sa BE, Chi BH, Rosenberg NE. “Characterizing populations prioritized for PrEP in 19 African countries: A review of national guidance.” Journal of the International AIDS Society. Accepted.
- Krajewski T, LeMasters KH, Oser CB, Brinkley-Rubinstein L. Perceived versus actual HIV risk among PrEP indicated persons with criminal legal involvement. AIDS care. 2024 Nov 1;36(11):1647-56.
- Lauckner C, Krajewski T, Mollan K, Nowotny KM, McLouth CJ, Oser CB, Brinkley-Rubinstein L. Associations between sexual minority status, hazardous drinking, and discrimination experiences among criminal legal-involved adults in the Southern PrEP Cohort (SPECS) study. Substance Use & Misuse. 2024 Oct 14;59(12):1751-7.
- LeMasters K, Krajewski T, Dong K, Brinkley-Rubinstein L, 2024. “Documenting competing needs to well-being among those on community supervision in the South.” Journal of Correctional Health Care, 30(1), 14–21. PMID: 38150566
- Lotspeich SC, Richardson BD, Baldoni PL, Enders KP, Hudgens MG, 2024. “Quantifying the HIV reservoir with dilution assays and deep viral sequencing.” Biometrics, 80(1):ujad018. PMC10873562
- McKellar MS, Keys JR, Filiatreau LM, McGee KS, Kuruc JD, Ferrari G, Margolis DM, Eron JJ, Hicks CB, Gay CL. Rapid viral suppression using integrase inhibitors during acute HIV-1 infection. J Antimicrobial Chemotherapy. 2024 Nov 6:dkae391. PMID: 39504491.
- Nelson AN, Shen X, Vekatayogi S, Zhang S, Ozorowski G, Dennis M, Sewall LM, Milligan E, Davis D, Cross KA, Chen Y, et al. Immunization with germ line–targeting SOSIP trimers elicits broadly neutralizing antibody precursors in infant macaques. Science Immunology. 2024 Aug 30;9(98):eadm7097.
- Rosenberg NE, Shook-Sa BE, Young AM, Zou Y, Stranix-Chibanda L, Yotebieng M, Sam-Agudu NA, Phiri SJ, Mutale W, Bekker LG, Charurat ME, et al. An HIV-1 risk assessment tool for women aged 15-49 in African countries: A pooled analysis across 15 nationally representative surveys. Clinical Infectious Diseases. 2024 In press.
- Shook-Sa BE, Hudgens MG, Knittel AK, Edmonds A, Ramirez C, Cole SR, Cohen M, Adedimeji A, Taylor T, Michel KG, Milam J, Cohen J, Donohue J, Foster A, Fischl M, Long D, Adimora AA. “Exposure effects on count outcomes with observational data, with application to incarcerated women.” Annals of Applied Statistics. 18(3): 2147-2165. PMC11526847
- Tembo TA, Mollan K, Simon K, Rutstein S, Chitani MJ, Saha PT, Mbeya-Munkhondya T, Jean-Baptiste M, Meek C, Mwapasa V, Go V. Does a blended learning implementation package enhance HIV index case testing in Malawi? A protocol for a cluster randomised controlled trial. BMJ Open. 2024 Jan 1;14(1):e077706.
- Wahl A, Yao W, Liao B, Chateau M, Richardson C, Ling L, Franks A, Senthil K, Doyon G, Li F, Frost J et al. A germ-free humanized mouse model shows the contribution of resident microbiota to human-specific pathogen infection. Nature Biotechnology. 2024 Jun;42(6):905-15.
- Zivich PN, Cole SR, Edwards JK, Glidden DV, Das M, Shook-Sa BE, Shao Y, Mehrotra ML, Adimora AA, Eron JJ. HIV Prevention Among Men Who Have Sex With Men: Tenofovir Alafenamide Combination Preexposure Prophylaxis Versus Placebo. The Journal of Infectious Diseases. 2024 Apr 15;229(4):1123-30.
- Zivich PN, Cole SR, Hudgens MG, Edwards JK, Shook-Sa BE, Breskin A. “Bridged treatment comparisons: an illustrative application in HIV treatment.” American Journal of Epidemiology. In Press. PMID: 39218437
- Zivich PN, Edwards JK, Shook-Sa BE, Lofgren ET, Lessler J, Cole SR. Synthesis estimators for transportability with positivity violations by a continuous covariate. Journal of the Royal Statistical Society Series A: Statistics in Society. 2024. In press.
- Zivich PN, Shook-Sa BE. Estimating marginal structural model parameters for time-fixed, binary actions with g-computation and estimating equations. American Journal of Epidemiology. 2024. In press. PMID: 39191643
Vias, N.P., Cassidy, C.E., Edwards, J.K., Xiong, K., Parker, C.B., Aiello, A.E., Boyce, R.M., Shook-Sa, B.E.“Accounting for outcome misclassification in complex sample designs: estimation of SARS-CoV-2 seroprevalence in central North Carolina.” Epidemiology, In press.