Department of Genetics faculty, postdocs, students and collaborators published 18 papers during February 2nd – March 1st 2025.
Li X, Chen H, Selvaraj MS, Van Buren E, Zhou H, Wang Y, Sun R, McCaw ZR, Yu Z, Jiang MZ, DiCorpo D, Gaynor SM, Dey R, Arnett DK, Benjamin EJ, Bis JC, Blangero J, Boerwinkle E, Bowden DW, Brody JA, Cade BE, Carson AP, Carlson JC, Chami N, Chen YI, Curran JE, de Vries PS, Fornage M, Franceschini N, Freedman BI, Gu C, Heard-Costa NL, He J, Hou L, Hung YJ, Irvin MR, Kaplan RC, Kardia SLR, Kelly TN, Konigsberg I, Kooperberg C, Kral BG, Li C, Li Y, Lin H, Liu CT, Loos RJF, Mahaney MC, Martin LW, Mathias RA, Mitchell BD, Montasser ME, Morrison AC, Naseri T, North KE, Palmer ND, Peyser PA, Psaty BM, Redline S, Reiner AP, Rich SS, Sitlani CM, Smith JA, Taylor KD, Tiwari HK, Vasan RS, Viali S, Wang Z, Wessel J, Yanek LR, Yu B; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Dupuis J, Meigs JB, Auer PL, Raffield LM, Manning AK, Rice KM, Rotter JI, Peloso GM, Natarajan P, Li Z, Liu Z, Lin X.
Nat Comput Sci. 2025 Feb 7. doi: 10.1038/s43588-024-00764-8. Online ahead of print.
PMID: 39920506
Long-COVID incidence proportion in adults and children between 2020 and 2024.
Mandel H, Yoo YJ, Allen AJ, Abedian S, Verzani Z, Karlson EW, Kleinman LC, Mudumbi PC, Oliveira CR, Muszynski JA, Gross RS, Carton TW, Kim C, Taylor E, Park H, Divers J, Kelly JD, Arnold J, Geary CR, Zang C, Tantisira KG, Rhee KE, Koropsak M, Mohandas S, Vasey A, Mohammad Mosa AS, Haendel M, Chute CG, Murphy SN, O’Brien L, Szmuszkovicz J, Guthe N, Santana JL, De A, Bogie AL, Halabi KC, Mohanraj L, Kinser PA, Packard SE, Tuttle KR, Hirabayashi K, Kaushal R, Pfaff E, Weiner MG, Thorpe LE, Moffitt RA.
Clin Infect Dis. 2025 Feb 5:ciaf046. doi: 10.1093/cid/ciaf046. Online ahead of print.
PMID: 39907495
Hartwell HJ, Shang B, Douillet C, Bousquet AG, Liu T, Zou F, Ideraabdullah F, Stýblo M, Fry RC.
Toxicol Appl Pharmacol. 2025 Feb 1;496:117242. doi: 10.1016/j.taap.2025.117242. Online ahead of print.
PMID: 39894169
Nguyen TD, Meijsen JJ, Sigström R, Kuja-Halkola R, Xiong Y, Harder A, Kowalec K, Pasman JA, Scarpa C, Hörbeck E, Jonsson L, Hägg S, Mullins N, O’Connell KS, Dalman C, Helenius D, Zetterberg R, Larsson H, Lichtenstein P, Andreassen OA, Werge T, Buil A, Landén M, Sullivan PF, Lu Y.
EBioMedicine. 2025 Jan 29;112:105576. doi: 10.1016/j.ebiom.2025.105576. Online ahead of print.
PMID: 39889373
Chaperone dysfunction in motor neuron disease: new insights from studies of the SMN complex.
Matera AG.
Genetics. 2025 Feb 5:iyae223. doi: 10.1093/genetics/iyae223. Online ahead of print.
PMID: 39907139
In Search of Representative Translational Cancer Model Systems.
Trembath HE, Spanheimer PM.
Cancer Res. 2025 Feb 1;85(3):407-409. doi: 10.1158/0008-5472.CAN-24-3879.
PMID: 39891927
Iyer KR, Clarke SL, Guarischi-Sousa R, Gjoni K, Heath AS, Young EP, Stitziel NO, Laurie C, Broome JG, Khan AT, Lewis JP, Xu H, Montasser ME, Ashley KE, Hasbani NR, Boerwinkle E, Morrison AC, Chami N, Do R, Rocheleau G, Lloyd-Jones DM, Lemaitre RN, Bis JC, Floyd JS, Kinney GL, Bowden DW, Palmer ND, Benjamin EJ, Nayor M, Yanek LR, Kral BG, Becker LC, Kardia SLR, Smith JA, Bielak LF, Norwood AF, Min YI, Carson AP, Post WS, Rich SS, Herrington D, Guo X, Taylor KD, Manson JE, Franceschini N, Pollard KS, Mitchell BD, Loos RJF, Fornage M, Hou L, Psaty BM, Young KA, Regan EA, Freedman BI, Vasan RS, Levy D, Mathias RA, Peyser PA, Raffield LM, Kooperberg C, Reiner AP, Rotter JI, Jun G, de Vries PS, Assimes TL.
J Am Heart Assoc. 2025 Feb 14:e036499. doi: 10.1161/JAHA.124.036499. Online ahead of print.
PMID: 39950338
A Bioconductor/R Workflow for the Detection and Visualization of Differential Chromatin Loops.
Flores JP, Davis E, Kramer N, Love MI, Phanstiel DH.
F1000Res. 2024 Nov 11;13:1346. doi: 10.12688/f1000research.153949.1. eCollection 2024.
PMID: 39931328 Free PMC article.
Regner MJ, Garcia-Recio S, Thennavan A, Wisniewska K, Mendez-Giraldez R, Felsheim B, Spanheimer PM, Parker JS, Perou CM, Franco HL.
Cell Genom. 2025 Feb 12;5(2):100765. doi: 10.1016/j.xgen.2025.100765. Epub 2025 Feb 5.
PMID: 39914387
Boudreau V, Larson BT, Gerbich TM, Fadero T, Yan V, Lucas-DeMott A, Yung J, Moulin SLY, Descovich CP, Slabodnick MM, Burlacot A, Wang JR, Niyogi KK, Marshall WF.
Mol Biol Cell. 2025 Feb 12:mbcE24120571. doi: 10.1091/mbc.E24-12-0571. Online ahead of print.
PMID: 39937680
Genomic Characteristics Related to Histology-based Immune Features in Breast Cancer.
Cha YJ, O’Connell CE, Calhoun BC, Felsheim BM, Fernandez-Martinez A, Fan C, Brueffer C, Larsson C, Borg Å, Saal LH, Perou CM.
Mod Pathol. 2025 Feb 14:100736. doi: 10.1016/j.modpat.2025.100736. Online ahead of print.
PMID: 39956271
Verbinnen I, Douzgou Houge S, Hsieh TC, Lesmann H, Kirchhoff A, Geneviève D, Brimble E, Lenaerts L, Haesen D, Levy RJ, Thevenon J, Faivre L, Marco E, Chong JX, Bamshad M, Patterson K, Mirzaa GM, Foss K, Dobyns W, White SM, Pais L, O’Heir E, Itzikowitz R, Donald KA, Van der Merwe C, Mussa A, Cervini R, Giorgio E, Roscioli T, Dias KR, Evans CA, Brown NJ, Ruiz A, Trujillo Quintero JP, Rabin R, Pappas J, Yuan H, Lachlan K, Thomas S, Devlin A, Wright M, Martin R, Karwowska J, Posmyk R, Chatron N, Stark Z, Heath O, Delatycki M, Buchert R, Korenke GC, Ramsey K, Narayanan V, Grange DK, Weisenberg JL, Haack TB, Karch S, Kipkemoi P, Mangi M, Bindels de Heus KGCB, de Wit MY, Barakat TS, Lim D, Van Winckel G, Spillmann RC, Shashi V, Jacob M, Stehr AM; Undiagnosed Diseases Network; Krawitz P, Douzgos Houge G, Janssens V.
Am J Hum Genet. 2025 Feb 14:S0002-9297(25)00021-7. doi: 10.1016/j.ajhg.2025.01.021. Online ahead of print.
PMID: 39978342
Hespe S, Waddell A, Asatryan B, Owens E, Thaxton C, Adduru ML, Anderson K, Brown EE, Hoffman-Andrews L, Jordan E, Josephs K, Mayers M, Peters S, Stafford F, Bagnall RD, Bronicki L, Callewaert B, Chahal CAA, James CA, Jarinova O, Landstrom AP, McNally EM, Murray B, Muiño-Mosquera L, Parikh V, Reuter C, Walsh R, Wayburn B, Ware JS, Ingles J.
J Am Coll Cardiol. 2025 Feb 25;85(7):727-740. doi: 10.1016/j.jacc.2024.12.010.
PMID: 39971408
Dharmadhikari AV, Abad MA, Khan S, Maroofian R, Sands TT, Ullah F, Samejima I, Shen Y, Wear MA, Moore KE, Kondakova E, Mitina N, Schaub T, Lee GK, Umandap CH, Berger SM, Iglesias AD, Popp B, Abou Jamra R, Gabriel H, Rentas S, Rippert AL, Gray C, Izumi K, Conlin LK, Koboldt DC, Mosher TM, Hickey SE, Albert DVF, Norwood H, Lewanda AF, Dai H, Liu P, Mitani T, Marafi D, Eker HK, Pehlivan D, Posey JE, Lippa NC, Vena N, Heinzen EL, Goldstein DB, Mignot C, de Sainte Agathe JM, Al-Sannaa NA, Zamani M, Sadeghian S, Azizimalamiri R, Seifia T, Zaki MS, Abdel-Salam GMH, Abdel-Hamid MS, Alabdi L, Alkuraya FS, Dawoud H, Lofty A, Bauer P, Zifarelli G, Afzal E, Zafar F, Efthymiou S, Gossett D, Towne MC, Yeneabat R, Perez-Duenas B, Cazurro-Gutierrez A, Verdura E, Cantarin-Extremera V, Marques ADV, Helwak A, Tollervey D, Wontakal SN, Aggarwal VS, Rosenfeld JA, Tarabykin V, Ohta S, Lupski JR, Houlden H, Earnshaw WC, Davis EE, Jeyaprakash AA, Liao J.
Nat Commun. 2025 Feb 17;16(1):1703. doi: 10.1038/s41467-025-56876-w.
PMID: 39962046 Free PMC article.
Stein JL, Pollen AA.
Curr Opin Genet Dev. 2025 Feb 24;92:102326. doi: 10.1016/j.gde.2025.102326. Online ahead of print.
PMID: 39999542 No abstract available.
Hu P, Hao Y, Tang W, Diering GH, Zou F, Kafri T.
Viruses. 2025 Feb 17;17(2):276. doi: 10.3390/v17020276.
PMID: 40007031 Free PMC article.
O-GalNAc glycans are enriched in neuronal tracts and regulate nodes of Ranvier.
Noel M, Suttapitugsakul S, Cummings RD, Mealer RG.
Proc Natl Acad Sci U S A. 2025 Mar 4;122(9):e2418949122. doi: 10.1073/pnas.2418949122. Epub 2025 Feb 25.
PMID: 39999163
Pazhayam NM, Sagar S, Sekelsky J.
Genetics. 2025 Feb 25:iyaf029. doi: 10.1093/genetics/iyaf029. Online ahead of print.
PMID: 39996709